I will analyze single cell rna seq and spatial transcriptomics data

Sommige informatie wordt in het Engels weergegeven.
5,0
5,0

Duitsland

Ik spreek Duits, Engels

10 bestellingen voltooid

Simple Solutions for Complex Biomedical Data

Hi, my name is Jonathan Alles. I am an independent bioinformatics and data engineering consultant. Through my agency, EVOBYTE Digital Biology, I support professionals with biomedical data engineering ...

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Over deze dienst

Do you need support in analyzing, integrating or interpreting single cell omics data?

I support research teams in data analysis for scRNA-Seq, single cell immune receptor or spatial omics analysis.


Customized analysis are possible: Get in touch for a quote.


What I Offer:

Bioinformatics Analysis

  • Bioinformatic processing of sequencing raw data
  • Aggregation, filtering, cleaning, batch correction
  • Metadata ingestion
  • Clustering and cluster annotation
  • Differential gene expression
  • Trajectory inference
  • GSEA / GO Term Analysis
  • Spatial neighborhood analysis

Visualization & Reporting

  • Jupyter notebook including analysis code
  • Custom PDF or HTML reports
  • Dashboards for data query

Pipeline Development & Automation

  • Automation and scaling of analysis pipelines
  • Database and cloud integration
  • Containerization

Data Curation

  • Collect (single-cell) omics data for a specific indication, therapeutic modality, species,...
  • Mine public data source and databases and return integrated dataset


Tech Stack

Python / Pandas / scVerse / scipy / Jupyter / TF / Bash / Cell Rank / squidpy / scVelo


Let's Build Together!

Have a project in mind? Message me to discuss your requirements, and I'll provide a customized

Programmeertaal:

Python

Technologie:

Jupyter-notitieboek

Type analyse:

Kwantitatieve analyse

Kwalitatieve analyse

Expertise:

Experimentontwerp

Trends

Algoritmes

Clusteranalyse

Tools:

Overige

Mijn portfolio

Reviews

2 reviews van deze dienst
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  • J

    j_chem23

    CA

    Canada

    5

    Extremely knowledgeable researcher with a high quality of work and professionalism. Reliable data analysis with easy to observe and digest results. Highly recommend.

    US$ 400-US$ 600

    Prijs

    8 dagen

    Looptijd

    Nuttig?
    Ja
    Geen
  • M

    matteobertelli

    IT

    Italië

    5

    Jonathan Alles is an outstanding professional in the field of Data Analytics. His meticulous attention to detail, unwavering professionalism, and exemplary responsiveness greatly contributed to a smooth and efficient collaboration. The quality of his work is exceptional, and I would unreservedly recommend...

    US$ 600-US$ 800

    Prijs

    3 weken geleden

    Looptijd

    Nuttig?
    Ja
    Geen
Reviews

2 reviews van deze dienst
5,0

(2)
(0)
(0)
(0)
(0)
Specificering van de beoordeling
  • Communicatieniveau van de freelancer
    5
  • Kwaliteit van de levering
    5
  • Waarde van de levering
    5
Sorteer op
Meest relevant
  • J

    j_chem23

    CA

    Canada

    5

    Extremely knowledgeable researcher with a high quality of work and professionalism. Reliable data analysis with easy to observe and digest results. Highly recommend.

    US$ 400-US$ 600

    Prijs

    8 dagen

    Looptijd

    Nuttig?
    Ja
    Geen
  • M

    matteobertelli

    IT

    Italië

    5

    Jonathan Alles is an outstanding professional in the field of Data Analytics. His meticulous attention to detail, unwavering professionalism, and exemplary responsiveness greatly contributed to a smooth and efficient collaboration. The quality of his work is exceptional, and I would unreservedly recommend...

    US$ 600-US$ 800

    Prijs

    3 weken geleden

    Looptijd

    Nuttig?
    Ja
    Geen

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